Single cell genome analysis supports a link between phagotrophy and primary plastid endosymbiosis

Debashish Bhattacharya1*, Dana C. Price1, Hwan Su Yoon2,3, Eun Chan Yang2, Robert A. Andersen4, and Sushma Parankush Das1
1Department of Ecology, Evolution and Natural Resources, and Institute of Marine and Coastal Sciences, Rutgers University, New Brunswick, NJ 08901, U.S.A.
2Bigelow Laboratory for Ocean Sciences, West Boothbay Harbor, ME 04575, U.S.A.
3Department of Biological Sciences, Sungkyunkwan University, Suwon 440-746, Korea
4Friday Harbor Laboratories, University of Washington, Friday Harbor, WA 98250 USA

* Corresponding author

DATA: Paulinella ovalis single amplified genome (SAG) 2
Celera WGS 6.0b assembly (25,808 unitigs), P. ovalis SAG2 Download (.fasta, 19MB)
Protein translations for contig sequences (136,233 total)
(Sequences w/ no blastx hit translated in 6-frame)
Download (.fasta, 35MB)
Protein alignments used as phylogenomic input Download (zipped .aln, 98MB)
PhyML 3.0 phylogenetic trees in NEWICK format (9,435 total) Download (zipped .tre, 8MB)
DATA: Paulinella ovalis single amplified genome (SAG) 1
Celera WGS 6.0b assembly (32,360 unitigs), P. ovalis SAG1 Download (.fasta, 23MB)
Protein translations for contig sequences (143,095 total)
(Sequences w/ no blastx hit translated in 6-frame)
Download (.fasta, 35MB)

©2010 Dana Price and Debashish Bhattacharya at Rutgers, The State University of New Jersey.